Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 LINC01711-201ENST00000598340 967 ntBASIC15.28■□□□□ 0.04
LRRC58Q96CX6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC58Q96CX6 AC023908.3-201ENST00000564211 3047 ntBASIC15.27■□□□□ 0.04
LRRC58Q96CX6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 AP002414.3-201ENST00000589352 1468 ntBASIC15.27■□□□□ 0.04
LRRC58Q96CX6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.27■□□□□ 0.04
LRRC58Q96CX6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 RNPS1P1-201ENST00000507437 918 ntBASIC15.27■□□□□ 0.04
LRRC58Q96CX6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC58Q96CX6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC58Q96CX6 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.03
LRRC58Q96CX6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 WASH6P-202ENST00000359512 1437 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 AC073439.1-201ENST00000624121 1774 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 GPX1P2-201ENST00000429271 606 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 HCG4P8-203ENST00000443049 980 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms