Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AC092978.1-202ENST00000637590 1327 ntBASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AC134407.2-201ENST00000625089 1978 ntBASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM43Q96BQ3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 AC016700.1-201ENST00000429424 312 ntBASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 HSPB1P2-201ENST00000448722 546 ntBASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 AC245884.6-201ENST00000515672 1067 ntBASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 ECM1P1-201ENST00000604092 1279 ntBASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM43Q96BQ3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 BCL2-203ENST00000589955 5011 ntBASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 RN7SL720P-201ENST00000488178 304 ntBASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 GAPDHP40-201ENST00000505218 1006 ntBASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 NEFHP1-201ENST00000412845 2629 ntBASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms