Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 RPL37AP1-201ENST00000412502 279 ntBASIC14.06□□□□□ -0.16
TMEM54Q969K7 KLF2P3-201ENST00000451977 1087 ntBASIC14.06□□□□□ -0.16
TMEM54Q969K7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 AC125807.1-201ENST00000483097 614 ntBASIC14.06□□□□□ -0.16
TMEM54Q969K7 AC067863.1-201ENST00000494933 530 ntBASIC14.06□□□□□ -0.16
TMEM54Q969K7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 SPDYE12P-201ENST00000618416 771 ntBASIC14.06□□□□□ -0.16
TMEM54Q969K7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 FO538757.1-201ENST00000623083 1397 ntBASIC14.06□□□□□ -0.16
TMEM54Q969K7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.05□□□□□ -0.16
TMEM54Q969K7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 METTL21AP1-201ENST00000438852 635 ntBASIC14.05□□□□□ -0.16
TMEM54Q969K7 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 AC140878.1-201ENST00000565277 250 ntBASIC14.05□□□□□ -0.16
TMEM54Q969K7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 AC020658.6-201ENST00000623564 1870 ntBASIC14.05□□□□□ -0.16
TMEM54Q969K7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TMEM54Q969K7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM54Q969K7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC132872.4-202ENST00000622924 2756 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms