Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP3S1Q92572 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP3S1Q92572 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 AC112907.2-201ENST00000448639 330 ntBASIC14.17□□□□□ -0.14
AP3S1Q92572 AC008550.1-201ENST00000511500 884 ntBASIC14.17□□□□□ -0.14
AP3S1Q92572 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.17□□□□□ -0.14
AP3S1Q92572 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.17□□□□□ -0.14
AP3S1Q92572 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 REXO1L3P-201ENST00000622202 1288 ntBASIC14.17□□□□□ -0.14
AP3S1Q92572 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP3S1Q92572 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S1Q92572 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S1Q92572 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
AP3S1Q92572 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP3S1Q92572 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
AP3S1Q92572 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
AP3S1Q92572 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 INTS4P1-201ENST00000438455 1935 ntBASIC14.16□□□□□ -0.14
AP3S1Q92572 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S1Q92572 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S1Q92572 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S1Q92572 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S1Q92572 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S1Q92572 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 KRT8P44-201ENST00000441609 1350 ntBASIC14.16□□□□□ -0.14
AP3S1Q92572 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.16□□□□□ -0.14
AP3S1Q92572 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.16□□□□□ -0.14
AP3S1Q92572 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
AP3S1Q92572 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 C8orf49-201ENST00000525043 1968 ntBASIC14.16□□□□□ -0.14
AP3S1Q92572 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S1Q92572 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
AP3S1Q92572 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms