Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 POM121L3P-201ENST00000419331 1163 ntBASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 AC005363.2-201ENST00000618631 242 ntBASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 AC006011.2-201ENST00000621313 1158 ntBASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMIM4Q8WVI0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 BX276092.5-203ENST00000456199 560 ntBASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AL365330.1-201ENST00000607459 531 ntBASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AL121672.3-201ENST00000608644 468 ntBASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 ZBED1P1-201ENST00000502364 1930 ntBASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM4Q8WVI0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 AC023024.2-201ENST00000623561 1993 ntBASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms