Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 SPDYE17-201ENST00000412399 783 ntBASIC16.95■□□□□ 0.3
UBA3Q8TBC4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 IGHV3-42-201ENST00000520410 361 ntBASIC16.95■□□□□ 0.3
UBA3Q8TBC4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBA3Q8TBC4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 KRT8P12-202ENST00000472924 1397 ntBASIC16.94■□□□□ 0.3
UBA3Q8TBC4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 AZGP1P1-201ENST00000411909 902 ntBASIC16.94■□□□□ 0.3
UBA3Q8TBC4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 AL390955.2-201ENST00000603032 514 ntBASIC16.94■□□□□ 0.3
UBA3Q8TBC4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 AC007950.2-201ENST00000615045 2347 ntBASIC16.94■□□□□ 0.3
UBA3Q8TBC4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 HYMAI-201ENST00000635591 3347 ntBASIC16.94■□□□□ 0.3
UBA3Q8TBC4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 AC011477.6-201ENST00000604980 1927 ntBASIC16.94■□□□□ 0.3
UBA3Q8TBC4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBA3Q8TBC4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AL080243.2-201ENST00000418783 582 ntBASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AC055876.3-201ENST00000431496 288 ntBASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 CYMP-203ENST00000474680 1263 ntBASIC16.93■□□□□ 0.3
UBA3Q8TBC4 HLA-V-204ENST00000476601 1289 ntBASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 AC138649.4-201ENST00000612222 287 ntBASIC16.93■□□□□ 0.3
UBA3Q8TBC4 TEX28P1-201ENST00000613479 1221 ntBASIC16.93■□□□□ 0.3
UBA3Q8TBC4 TEX28P2-201ENST00000617764 1221 ntBASIC16.93■□□□□ 0.3
UBA3Q8TBC4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms