Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZFP28Q8NHY6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZFP28Q8NHY6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 U82695.1-201ENST00000635752 1889 ntBASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 AC104109.2-201ENST00000602919 1418 ntBASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 KRT18P34-201ENST00000488218 1270 ntBASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.52■□□□□ 0.08
ZFP28Q8NHY6 AL009183.1-201ENST00000603760 355 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms