Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 MTND6P24-201ENST00000440466 518 ntBASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC004890.2-204ENST00000481968 304 ntBASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC190387.1-201ENST00000551683 408 ntBASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC008761.3-201ENST00000624803 892 ntBASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 AL035456.1-201ENST00000456064 1369 ntBASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDND2Q8NHS1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 AL512652.2-201ENST00000625156 1716 ntBASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms