Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 AC069120.2-201ENST00000524091 540 ntBASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 AL035252.4-201ENST00000624174 288 ntBASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 AC084121.4-201ENST00000641598 221 ntBASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 AF228730.8-201ENST00000642140 221 ntBASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FBXO39Q8N4B4 AC063926.3-201ENST00000624734 5658 ntBASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 TSPY26P-202ENST00000565928 3884 ntBASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 AL158211.3-201ENST00000607385 239 ntBASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 AC008267.7-201ENST00000624570 1194 ntBASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 AC112504.1-201ENST00000623415 1841 ntBASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 AC069224.1-201ENST00000566372 1715 ntBASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FBXO39Q8N4B4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms