Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 RPSAP52-203ENST00000622976 1023 ntBASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 CU634019.7-201ENST00000624153 1185 ntBASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 FP236241.2-201ENST00000624906 1185 ntBASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 AC245100.5-201ENST00000452108 331 ntBASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 RNA5SP412-201ENST00000516234 123 ntBASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 AL583810.1-201ENST00000553344 1045 ntBASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 AL606495.2-201ENST00000605867 535 ntBASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 AL158212.4-201ENST00000624062 1286 ntBASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 AL133338.1-201ENST00000565695 1517 ntBASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNPOQ8N3V7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 TUBB1P2-201ENST00000422712 1306 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 TUBB1P1-201ENST00000503144 1300 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 AL691432.1-201ENST00000596308 1422 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 RPL13P2-201ENST00000440687 659 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 CTBP2P5-201ENST00000454986 1264 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 FO681548.1-201ENST00000455617 1132 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 RPL13AP25-201ENST00000484130 612 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 AC243562.2-201ENST00000561247 970 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms