Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AC132938.2-201ENST00000579188 680 ntBASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 IGHV3-72-202ENST00000621503 303 ntBASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 AL591163.1-201ENST00000641757 987 ntBASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ARHGEF16Q5VV41 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 AL596087.1-201ENST00000400979 1969 ntBASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 RN7SL399P-201ENST00000471648 279 ntBASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 TMEM261P1-201ENST00000604899 340 ntBASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 AL158212.4-201ENST00000624062 1286 ntBASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.04■□□□□ 0.48
ARHGEF16Q5VV41 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF16Q5VV41 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms