Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRTGQ2VWP7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
PRTGQ2VWP7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.08■□□□□ 0
PRTGQ2VWP7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 DOC2GP-202ENST00000514950 1163 ntBASIC15.08■□□□□ 0
PRTGQ2VWP7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.08■□□□□ 0
PRTGQ2VWP7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.08■□□□□ 0
PRTGQ2VWP7 LINC01115-203ENST00000606068 577 ntBASIC15.08■□□□□ 0
PRTGQ2VWP7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 AC026691.1-201ENST00000602502 2017 ntBASIC15.08■□□□□ 0
PRTGQ2VWP7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.08■□□□□ 0
PRTGQ2VWP7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRTGQ2VWP7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PRTGQ2VWP7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.07■□□□□ 0
PRTGQ2VWP7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PRTGQ2VWP7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 AL607033.1-201ENST00000623900 1599 ntBASIC15.07■□□□□ 0
PRTGQ2VWP7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PRTGQ2VWP7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.07■□□□□ 0
PRTGQ2VWP7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PRTGQ2VWP7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.07■□□□□ 0
PRTGQ2VWP7 PIN1P1-201ENST00000412108 996 ntBASIC15.07■□□□□ 0
PRTGQ2VWP7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.07■□□□□ 0
PRTGQ2VWP7 GNAQP1-201ENST00000444815 1067 ntBASIC15.07■□□□□ 0
PRTGQ2VWP7 AL589987.1-201ENST00000453380 819 ntBASIC15.07■□□□□ 0
PRTGQ2VWP7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.07■□□□□ 0
PRTGQ2VWP7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.07■□□□□ 0
PRTGQ2VWP7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.07■□□□□ 0
PRTGQ2VWP7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.07■□□□□ 0
PRTGQ2VWP7 AC004233.3-201ENST00000607794 1269 ntBASIC15.07■□□□□ 0
PRTGQ2VWP7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.07■□□□□ 0
PRTGQ2VWP7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.07■□□□□ 0
PRTGQ2VWP7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.07■□□□□ 0
PRTGQ2VWP7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PRTGQ2VWP7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRTGQ2VWP7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms