Protein–RNA interactions for Protein: Q02818

NUCB1, Nucleobindin-1, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1Q02818 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUCB1Q02818 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NUCB1Q02818 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.71■□□□□ 0.75
NUCB1Q02818 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUCB1Q02818 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.71■□□□□ 0.75
NUCB1Q02818 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUCB1Q02818 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUCB1Q02818 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUCB1Q02818 AL627223.1-201ENST00000416693 442 ntBASIC19.71■□□□□ 0.75
NUCB1Q02818 AC005237.2-201ENST00000434368 219 ntBASIC19.71■□□□□ 0.75
NUCB1Q02818 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.71■□□□□ 0.75
NUCB1Q02818 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.71■□□□□ 0.75
NUCB1Q02818 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.71■□□□□ 0.75
NUCB1Q02818 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.71■□□□□ 0.75
NUCB1Q02818 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.71■□□□□ 0.75
NUCB1Q02818 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.71■□□□□ 0.75
NUCB1Q02818 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NUCB1Q02818 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NUCB1Q02818 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUCB1Q02818 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NUCB1Q02818 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
NUCB1Q02818 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.71■□□□□ 0.75
NUCB1Q02818 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NUCB1Q02818 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
NUCB1Q02818 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NUCB1Q02818 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.7■□□□□ 0.74
NUCB1Q02818 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.7■□□□□ 0.74
NUCB1Q02818 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.7■□□□□ 0.74
NUCB1Q02818 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.7■□□□□ 0.74
NUCB1Q02818 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 DNAJB3-201ENST00000446806 729 ntBASIC19.7■□□□□ 0.74
NUCB1Q02818 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.7■□□□□ 0.74
NUCB1Q02818 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.7■□□□□ 0.74
NUCB1Q02818 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
NUCB1Q02818 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.7■□□□□ 0.74
NUCB1Q02818 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.7■□□□□ 0.74
NUCB1Q02818 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 TNRC18P2-201ENST00000417666 2714 ntBASIC19.7■□□□□ 0.74
NUCB1Q02818 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.7■□□□□ 0.74
NUCB1Q02818 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUCB1Q02818 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.69■□□□□ 0.74
NUCB1Q02818 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
NUCB1Q02818 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.69■□□□□ 0.74
NUCB1Q02818 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NUCB1Q02818 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 AZGP1P1-201ENST00000411909 902 ntBASIC19.69■□□□□ 0.74
NUCB1Q02818 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.69■□□□□ 0.74
NUCB1Q02818 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
NUCB1Q02818 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.69■□□□□ 0.74
NUCB1Q02818 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.69■□□□□ 0.74
NUCB1Q02818 AC112482.1-201ENST00000492080 688 ntBASIC19.69■□□□□ 0.74
NUCB1Q02818 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.69■□□□□ 0.74
NUCB1Q02818 AC105021.1-202ENST00000570572 669 ntBASIC19.69■□□□□ 0.74
NUCB1Q02818 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
NUCB1Q02818 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NUCB1Q02818 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUCB1Q02818 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUCB1Q02818 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.68■□□□□ 0.74
NUCB1Q02818 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.68■□□□□ 0.74
NUCB1Q02818 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUCB1Q02818 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NUCB1Q02818 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
NUCB1Q02818 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUCB1Q02818 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUCB1Q02818 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUCB1Q02818 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.68■□□□□ 0.74
NUCB1Q02818 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.68■□□□□ 0.74
NUCB1Q02818 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUCB1Q02818 AC136604.1-201ENST00000418535 575 ntBASIC19.68■□□□□ 0.74
NUCB1Q02818 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.68■□□□□ 0.74
NUCB1Q02818 HIST3H2BA-201ENST00000436555 524 ntBASIC19.68■□□□□ 0.74
NUCB1Q02818 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms