Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.64□□□□□ -0.07
CXCR4P61073 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CXCR4P61073 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CXCR4P61073 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 KRT18P31-201ENST00000506277 1292 ntBASIC14.64□□□□□ -0.07
CXCR4P61073 KRT18P35-201ENST00000510488 1269 ntBASIC14.64□□□□□ -0.07
CXCR4P61073 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 AL121772.3-201ENST00000610840 674 ntBASIC14.64□□□□□ -0.07
CXCR4P61073 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CXCR4P61073 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCR4P61073 AP001282.1-201ENST00000531301 1499 ntBASIC14.63□□□□□ -0.07
CXCR4P61073 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CXCR4P61073 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.63□□□□□ -0.07
CXCR4P61073 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.63□□□□□ -0.07
CXCR4P61073 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCR4P61073 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.63□□□□□ -0.07
CXCR4P61073 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.63□□□□□ -0.07
CXCR4P61073 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.63□□□□□ -0.07
CXCR4P61073 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.63□□□□□ -0.07
CXCR4P61073 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.63□□□□□ -0.07
CXCR4P61073 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCR4P61073 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCR4P61073 MIR3652-201ENST00000579335 131 ntBASIC14.63□□□□□ -0.07
CXCR4P61073 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.63□□□□□ -0.07
CXCR4P61073 AC006557.2-201ENST00000592985 1240 ntBASIC14.63□□□□□ -0.07
CXCR4P61073 AC025062.2-201ENST00000605477 670 ntBASIC14.63□□□□□ -0.07
CXCR4P61073 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CXCR4P61073 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCR4P61073 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.63□□□□□ -0.07
CXCR4P61073 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCR4P61073 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.63□□□□□ -0.07
CXCR4P61073 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CXCR4P61073 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CXCR4P61073 AC129492.6-201ENST00000611383 1305 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms