Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCL23P55773 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCL23P55773 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCL23P55773 ELK2AP-201ENST00000392510 1007 ntBASIC17.26■□□□□ 0.35
CCL23P55773 CNN2P8-201ENST00000421872 913 ntBASIC17.26■□□□□ 0.35
CCL23P55773 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL23P55773 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL23P55773 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.26■□□□□ 0.35
CCL23P55773 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.26■□□□□ 0.35
CCL23P55773 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CCL23P55773 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL23P55773 AL607033.1-201ENST00000623900 1599 ntBASIC17.26■□□□□ 0.35
CCL23P55773 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.26■□□□□ 0.35
CCL23P55773 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CCL23P55773 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 AC134407.2-201ENST00000625089 1978 ntBASIC17.26■□□□□ 0.35
CCL23P55773 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL23P55773 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL23P55773 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL23P55773 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL23P55773 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL23P55773 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL23P55773 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCL23P55773 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.25■□□□□ 0.35
CCL23P55773 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL23P55773 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.25■□□□□ 0.35
CCL23P55773 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 AC022137.2-201ENST00000503482 481 ntBASIC17.25■□□□□ 0.35
CCL23P55773 RNA5SP423-201ENST00000517127 109 ntBASIC17.25■□□□□ 0.35
CCL23P55773 AP001582.1-201ENST00000525856 295 ntBASIC17.25■□□□□ 0.35
CCL23P55773 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL23P55773 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCL23P55773 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.25■□□□□ 0.35
CCL23P55773 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.25■□□□□ 0.35
CCL23P55773 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL23P55773 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CCL23P55773 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL23P55773 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL23P55773 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL23P55773 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCL23P55773 AC078925.2-201ENST00000624013 1973 ntBASIC17.24■□□□□ 0.35
CCL23P55773 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL23P55773 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCL23P55773 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCL23P55773 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL23P55773 FAM197Y7-201ENST00000432892 766 ntBASIC17.24■□□□□ 0.35
CCL23P55773 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.24■□□□□ 0.35
CCL23P55773 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.24■□□□□ 0.35
CCL23P55773 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCL23P55773 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL23P55773 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL23P55773 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.24■□□□□ 0.35
CCL23P55773 MIR4741-201ENST00000579822 90 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms