Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB3P54284 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB3P54284 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB3P54284 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNB3P54284 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB3P54284 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB3P54284 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CACNB3P54284 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CACNB3P54284 AC092364.2-201ENST00000596710 2692 ntBASIC18.82■□□□□ 0.6
CACNB3P54284 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNB3P54284 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB3P54284 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNB3P54284 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CACNB3P54284 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
CACNB3P54284 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.82■□□□□ 0.6
CACNB3P54284 ACTBP11-201ENST00000436287 1126 ntBASIC18.82■□□□□ 0.6
CACNB3P54284 CSF2RBP1-201ENST00000447905 391 ntBASIC18.82■□□□□ 0.6
CACNB3P54284 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 PTP4A1P2-201ENST00000546033 454 ntBASIC18.82■□□□□ 0.6
CACNB3P54284 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNB3P54284 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNB3P54284 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNB3P54284 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB3P54284 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB3P54284 AC005252.2-201ENST00000624630 1141 ntBASIC18.82■□□□□ 0.6
CACNB3P54284 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNB3P54284 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNB3P54284 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.82■□□□□ 0.6
CACNB3P54284 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB3P54284 AL662844.4-201ENST00000606367 2838 ntBASIC18.82■□□□□ 0.6
CACNB3P54284 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB3P54284 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.81■□□□□ 0.6
CACNB3P54284 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CACNB3P54284 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 AC106760.1-201ENST00000508690 800 ntBASIC18.81■□□□□ 0.6
CACNB3P54284 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CACNB3P54284 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 RN7SL219P-201ENST00000582872 296 ntBASIC18.81■□□□□ 0.6
CACNB3P54284 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB3P54284 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB3P54284 AC244669.2-201ENST00000612320 853 ntBASIC18.81■□□□□ 0.6
CACNB3P54284 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB3P54284 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.81■□□□□ 0.6
CACNB3P54284 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CACNB3P54284 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CACNB3P54284 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB3P54284 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB3P54284 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB3P54284 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB3P54284 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CACNB3P54284 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 AC005229.1-201ENST00000392885 409 ntBASIC18.8■□□□□ 0.6
CACNB3P54284 AC092933.1-201ENST00000393644 945 ntBASIC18.8■□□□□ 0.6
CACNB3P54284 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms