Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC34P49427 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.73□□□□□ -0.37
CDC34P49427 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC34P49427 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 AC233702.3-201ENST00000578656 1387 ntBASIC12.72□□□□□ -0.37
CDC34P49427 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 AL139424.1-201ENST00000607572 797 ntBASIC12.72□□□□□ -0.37
CDC34P49427 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 AF228730.7-201ENST00000641842 219 ntBASIC12.72□□□□□ -0.37
CDC34P49427 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 AC007686.3-201ENST00000619017 3487 ntBASIC12.72□□□□□ -0.37
CDC34P49427 AC087386.2-201ENST00000623212 4637 ntBASIC12.72□□□□□ -0.37
CDC34P49427 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.72□□□□□ -0.37
CDC34P49427 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.72□□□□□ -0.37
CDC34P49427 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDC34P49427 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.71□□□□□ -0.37
CDC34P49427 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 AC105250.1-201ENST00000509378 2057 ntBASIC12.71□□□□□ -0.37
CDC34P49427 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.71□□□□□ -0.37
CDC34P49427 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CDC34P49427 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.71□□□□□ -0.37
CDC34P49427 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 AC013726.1-201ENST00000563747 2285 ntBASIC12.71□□□□□ -0.37
CDC34P49427 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.71□□□□□ -0.37
CDC34P49427 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CDC34P49427 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.71□□□□□ -0.37
CDC34P49427 HCG4-201ENST00000418983 998 ntBASIC12.71□□□□□ -0.37
CDC34P49427 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 BX276092.5-203ENST00000456199 560 ntBASIC12.71□□□□□ -0.37
CDC34P49427 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms