Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AL513477.1-201ENST00000602865 2407 ntBASIC14.29□□□□□ -0.12
CSNK1A1P48729 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AL353705.2-201ENST00000428243 662 ntBASIC14.29□□□□□ -0.12
CSNK1A1P48729 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AL596442.2-201ENST00000610240 980 ntBASIC14.29□□□□□ -0.12
CSNK1A1P48729 AC023511.2-201ENST00000618803 211 ntBASIC14.29□□□□□ -0.12
CSNK1A1P48729 AC009093.7-201ENST00000623853 1223 ntBASIC14.29□□□□□ -0.12
CSNK1A1P48729 AC079781.4-201ENST00000641908 219 ntBASIC14.29□□□□□ -0.12
CSNK1A1P48729 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AL596257.1-201ENST00000641463 2694 ntBASIC14.29□□□□□ -0.12
CSNK1A1P48729 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1A1P48729 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1A1P48729 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 AL139010.1-201ENST00000454878 894 ntBASIC14.28□□□□□ -0.12
CSNK1A1P48729 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms