Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MMP13P45452 MIR648-201ENST00000385046 94 ntBASIC16.69■□□□□ 0.26
MMP13P45452 AC211486.1-202ENST00000416371 468 ntBASIC16.69■□□□□ 0.26
MMP13P45452 SPCS2P4-201ENST00000436160 681 ntBASIC16.69■□□□□ 0.26
MMP13P45452 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 AC211476.1-201ENST00000503899 468 ntBASIC16.69■□□□□ 0.26
MMP13P45452 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
MMP13P45452 IGHV3-62-201ENST00000520057 340 ntBASIC16.69■□□□□ 0.26
MMP13P45452 AC105233.2-201ENST00000523697 349 ntBASIC16.69■□□□□ 0.26
MMP13P45452 AF228730.5-201ENST00000530288 346 ntBASIC16.69■□□□□ 0.26
MMP13P45452 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.69■□□□□ 0.26
MMP13P45452 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.69■□□□□ 0.26
MMP13P45452 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.69■□□□□ 0.26
MMP13P45452 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP13P45452 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP13P45452 AC073389.1-201ENST00000595595 795 ntBASIC16.69■□□□□ 0.26
MMP13P45452 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.69■□□□□ 0.26
MMP13P45452 AC105339.1-204ENST00000636249 355 ntBASIC16.69■□□□□ 0.26
MMP13P45452 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
MMP13P45452 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP13P45452 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP13P45452 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MMP13P45452 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MMP13P45452 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MMP13P45452 AC020658.6-201ENST00000623564 1870 ntBASIC16.69■□□□□ 0.26
MMP13P45452 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MMP13P45452 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP13P45452 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
MMP13P45452 AL109954.1-202ENST00000564051 2148 ntBASIC16.69■□□□□ 0.26
MMP13P45452 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP13P45452 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 AP002414.2-201ENST00000591780 3365 ntBASIC16.68■□□□□ 0.26
MMP13P45452 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
MMP13P45452 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP13P45452 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP13P45452 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.68■□□□□ 0.26
MMP13P45452 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP13P45452 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP13P45452 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP13P45452 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.68■□□□□ 0.26
MMP13P45452 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP13P45452 AC022145.2-201ENST00000598203 171 ntBASIC16.68■□□□□ 0.26
MMP13P45452 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.68■□□□□ 0.26
MMP13P45452 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP13P45452 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP13P45452 AL592424.1-201ENST00000563624 1536 ntBASIC16.68■□□□□ 0.26
MMP13P45452 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MMP13P45452 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MMP13P45452 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP13P45452 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP13P45452 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP13P45452 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP13P45452 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms