Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 AC105250.1-201ENST00000509378 2057 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 AC005089.1-201ENST00000619486 2241 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 CICP23-201ENST00000605013 2741 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NKX2-1P43699 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 PTCHD3P3-201ENST00000403073 906 ntBASIC13.18□□□□□ -0.3
NKX2-1P43699 AC104819.1-201ENST00000504587 486 ntBASIC13.18□□□□□ -0.3
NKX2-1P43699 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 AC091076.1-201ENST00000610741 619 ntBASIC13.18□□□□□ -0.3
NKX2-1P43699 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-1P43699 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-1P43699 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-1P43699 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-1P43699 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-1P43699 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-1P43699 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX2-1P43699 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-1P43699 AC107918.2-201ENST00000530817 355 ntBASIC13.17□□□□□ -0.3
NKX2-1P43699 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 AC139887.3-201ENST00000568585 713 ntBASIC13.17□□□□□ -0.3
NKX2-1P43699 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-1P43699 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-1P43699 AP002414.4-201ENST00000589764 1148 ntBASIC13.17□□□□□ -0.3
NKX2-1P43699 AL139288.1-201ENST00000623748 933 ntBASIC13.17□□□□□ -0.3
NKX2-1P43699 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-1P43699 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-1P43699 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-1P43699 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms