Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
ATP2B4P23634 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP2B4P23634 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 AC106760.1-201ENST00000508690 800 ntBASIC19.23■□□□□ 0.67
ATP2B4P23634 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.23■□□□□ 0.67
ATP2B4P23634 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP2B4P23634 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.23■□□□□ 0.67
ATP2B4P23634 AC093813.1-201ENST00000605066 256 ntBASIC19.23■□□□□ 0.67
ATP2B4P23634 MIR6869-201ENST00000619434 62 ntBASIC19.23■□□□□ 0.67
ATP2B4P23634 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP2B4P23634 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 AC022211.2-201ENST00000585075 2527 ntBASIC19.23■□□□□ 0.67
ATP2B4P23634 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATP2B4P23634 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP2B4P23634 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATP2B4P23634 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.23■□□□□ 0.67
ATP2B4P23634 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATP2B4P23634 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B4P23634 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
ATP2B4P23634 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATP2B4P23634 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2B4P23634 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2B4P23634 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ATP2B4P23634 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2B4P23634 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2B4P23634 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ATP2B4P23634 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2B4P23634 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2B4P23634 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ATP2B4P23634 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B4P23634 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B4P23634 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 AGGF1P2-201ENST00000426656 2106 ntBASIC19.21■□□□□ 0.67
ATP2B4P23634 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B4P23634 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.21■□□□□ 0.67
ATP2B4P23634 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATP2B4P23634 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 AL133267.1-201ENST00000398220 340 ntBASIC19.21■□□□□ 0.67
ATP2B4P23634 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP2B4P23634 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B4P23634 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B4P23634 AC022137.2-201ENST00000503482 481 ntBASIC19.21■□□□□ 0.67
ATP2B4P23634 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.21■□□□□ 0.67
ATP2B4P23634 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B4P23634 AC079316.1-201ENST00000548397 411 ntBASIC19.21■□□□□ 0.67
ATP2B4P23634 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B4P23634 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2B4P23634 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP2B4P23634 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP2B4P23634 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATP2B4P23634 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B4P23634 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2B4P23634 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ATP2B4P23634 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2B4P23634 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.66
ATP2B4P23634 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 AC018892.3-201ENST00000623986 2499 ntBASIC19.2■□□□□ 0.66
ATP2B4P23634 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms