Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNB1P20700 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 AL451050.2-201ENST00000606967 682 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 CU633904.3-201ENST00000624042 1029 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.24■□□□□ 0.67
LMNB1P20700 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 LINC01144-201ENST00000626198 1710 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LMNB1P20700 CROCCP2-202ENST00000412962 2773 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.24■□□□□ 0.67
LMNB1P20700 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNB1P20700 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
LMNB1P20700 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 POM121L10P-201ENST00000436994 1285 ntBASIC19.23■□□□□ 0.67
LMNB1P20700 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 AC245884.6-201ENST00000515672 1067 ntBASIC19.23■□□□□ 0.67
LMNB1P20700 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.23■□□□□ 0.67
LMNB1P20700 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LMNB1P20700 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.23■□□□□ 0.67
LMNB1P20700 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNB1P20700 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNB1P20700 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LMNB1P20700 AL138709.1-201ENST00000614840 1693 ntBASIC19.22■□□□□ 0.67
LMNB1P20700 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
LMNB1P20700 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
LMNB1P20700 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LMNB1P20700 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.22■□□□□ 0.67
LMNB1P20700 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.22■□□□□ 0.67
LMNB1P20700 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.22■□□□□ 0.67
LMNB1P20700 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.22■□□□□ 0.67
LMNB1P20700 AC126915.1-201ENST00000522847 1038 ntBASIC19.22■□□□□ 0.67
LMNB1P20700 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.22■□□□□ 0.67
LMNB1P20700 AP001582.1-201ENST00000525856 295 ntBASIC19.22■□□□□ 0.67
LMNB1P20700 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
LMNB1P20700 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 AC145423.3-201ENST00000615987 467 ntBASIC19.22■□□□□ 0.67
LMNB1P20700 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.22■□□□□ 0.67
LMNB1P20700 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.22■□□□□ 0.67
LMNB1P20700 AC006453.4-201ENST00000636949 1252 ntBASIC19.22■□□□□ 0.67
LMNB1P20700 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.22■□□□□ 0.67
LMNB1P20700 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LMNB1P20700 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LMNB1P20700 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
LMNB1P20700 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNB1P20700 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
LMNB1P20700 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LMNB1P20700 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LMNB1P20700 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.21■□□□□ 0.67
LMNB1P20700 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.21■□□□□ 0.67
LMNB1P20700 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.21■□□□□ 0.67
LMNB1P20700 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LMNB1P20700 RPL17P11-201ENST00000417593 544 ntBASIC19.21■□□□□ 0.67
LMNB1P20700 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.21■□□□□ 0.67
LMNB1P20700 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.21■□□□□ 0.67
LMNB1P20700 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
LMNB1P20700 DRD5P1-201ENST00000456605 1438 ntBASIC19.21■□□□□ 0.67
LMNB1P20700 KRT18P25-201ENST00000508931 1278 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms