Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.11□□□□□ -0.15
RAB3BP20337 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.11□□□□□ -0.15
RAB3BP20337 AL805961.1-202ENST00000641562 540 ntBASIC14.11□□□□□ -0.15
RAB3BP20337 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB3BP20337 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB3BP20337 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
RAB3BP20337 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB3BP20337 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3BP20337 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RAB3BP20337 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 AC013726.1-201ENST00000563747 2285 ntBASIC14.1□□□□□ -0.15
RAB3BP20337 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3BP20337 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB3BP20337 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB3BP20337 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RAB3BP20337 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 AL031133.1-201ENST00000406807 723 ntBASIC14.09□□□□□ -0.15
RAB3BP20337 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB3BP20337 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 AC245100.5-201ENST00000452108 331 ntBASIC14.09□□□□□ -0.15
RAB3BP20337 KRT16P4-201ENST00000453883 522 ntBASIC14.09□□□□□ -0.15
RAB3BP20337 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB3BP20337 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 397.9 ms