Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC211476.1-201ENST00000503899 468 ntBASIC18.53■□□□□ 0.56
ATP2B1P20020 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B1P20020 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
ATP2B1P20020 AC069224.1-201ENST00000566372 1715 ntBASIC18.53■□□□□ 0.56
ATP2B1P20020 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B1P20020 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP2B1P20020 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.53■□□□□ 0.56
ATP2B1P20020 AC139530.3-201ENST00000620344 690 ntBASIC18.53■□□□□ 0.56
ATP2B1P20020 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.53■□□□□ 0.56
ATP2B1P20020 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B1P20020 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B1P20020 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B1P20020 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP2B1P20020 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B1P20020 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B1P20020 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP2B1P20020 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B1P20020 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B1P20020 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.53■□□□□ 0.56
ATP2B1P20020 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
ATP2B1P20020 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ATP2B1P20020 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B1P20020 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B1P20020 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ATP2B1P20020 MIR346-201ENST00000362234 95 ntBASIC18.52■□□□□ 0.56
ATP2B1P20020 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B1P20020 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B1P20020 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ATP2B1P20020 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
ATP2B1P20020 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
ATP2B1P20020 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP2B1P20020 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2B1P20020 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP2B1P20020 MIR4321-201ENST00000592276 80 ntBASIC18.52■□□□□ 0.56
ATP2B1P20020 AL365330.1-201ENST00000607459 531 ntBASIC18.52■□□□□ 0.56
ATP2B1P20020 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 AC006538.3-201ENST00000612495 578 ntBASIC18.52■□□□□ 0.56
ATP2B1P20020 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP2B1P20020 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B1P20020 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B1P20020 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP2B1P20020 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2B1P20020 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ATP2B1P20020 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP2B1P20020 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
ATP2B1P20020 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP2B1P20020 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2B1P20020 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2B1P20020 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ATP2B1P20020 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP2B1P20020 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP2B1P20020 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ATP2B1P20020 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2B1P20020 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ATP2B1P20020 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 HAUS4P1-201ENST00000406739 1145 ntBASIC18.51■□□□□ 0.55
ATP2B1P20020 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2B1P20020 RPS8P6-201ENST00000426177 609 ntBASIC18.51■□□□□ 0.55
ATP2B1P20020 FAM58DP-201ENST00000428076 619 ntBASIC18.51■□□□□ 0.55
ATP2B1P20020 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP2B1P20020 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.51■□□□□ 0.55
ATP2B1P20020 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2B1P20020 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2B1P20020 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2B1P20020 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B1P20020 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP2B1P20020 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2B1P20020 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP2B1P20020 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP2B1P20020 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2B1P20020 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
ATP2B1P20020 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ATP2B1P20020 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP2B1P20020 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP2B1P20020 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP2B1P20020 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2B1P20020 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP2B1P20020 AC093520.2-201ENST00000561830 333 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms