Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 HLA-A-202ENST00000376806 1854 ntBASIC18.54■□□□□ 0.56
ERCC3P19447 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC3P19447 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ERCC3P19447 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC3P19447 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 AC098850.1-201ENST00000419919 790 ntBASIC18.54■□□□□ 0.56
ERCC3P19447 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.54■□□□□ 0.56
ERCC3P19447 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ERCC3P19447 ACA64.2-201ENST00000459014 129 ntBASIC18.54■□□□□ 0.56
ERCC3P19447 RN7SL837P-201ENST00000463010 287 ntBASIC18.54■□□□□ 0.56
ERCC3P19447 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ERCC3P19447 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ERCC3P19447 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ERCC3P19447 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ERCC3P19447 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.54■□□□□ 0.56
ERCC3P19447 AC017083.2-201ENST00000608069 979 ntBASIC18.54■□□□□ 0.56
ERCC3P19447 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ERCC3P19447 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC3P19447 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC3P19447 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.53■□□□□ 0.56
ERCC3P19447 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.53■□□□□ 0.56
ERCC3P19447 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 AC112492.5-201ENST00000421897 457 ntBASIC18.53■□□□□ 0.56
ERCC3P19447 AL136982.4-201ENST00000437689 1740 ntBASIC18.53■□□□□ 0.56
ERCC3P19447 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ERCC3P19447 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.53■□□□□ 0.56
ERCC3P19447 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ERCC3P19447 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.53■□□□□ 0.56
ERCC3P19447 U82695.1-201ENST00000635752 1889 ntBASIC18.53■□□□□ 0.56
ERCC3P19447 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ERCC3P19447 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ERCC3P19447 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC3P19447 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.52■□□□□ 0.56
ERCC3P19447 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.52■□□□□ 0.56
ERCC3P19447 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ERCC3P19447 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ERCC3P19447 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms