Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.19■□□□□ 0.66
NCLP19338 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NCLP19338 ST20-AS1-201ENST00000560255 4223 ntBASIC19.19■□□□□ 0.66
NCLP19338 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NCLP19338 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NCLP19338 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NCLP19338 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
NCLP19338 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLP19338 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLP19338 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCLP19338 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.18■□□□□ 0.66
NCLP19338 IGHV3-22-201ENST00000520721 359 ntBASIC19.18■□□□□ 0.66
NCLP19338 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.18■□□□□ 0.66
NCLP19338 AC008735.5-201ENST00000623544 497 ntBASIC19.18■□□□□ 0.66
NCLP19338 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLP19338 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
NCLP19338 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLP19338 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLP19338 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NCLP19338 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLP19338 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 LINC01144-201ENST00000626198 1710 ntBASIC19.17■□□□□ 0.66
NCLP19338 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLP19338 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NCLP19338 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
NCLP19338 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.17■□□□□ 0.66
NCLP19338 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.17■□□□□ 0.66
NCLP19338 AC091167.2-201ENST00000579581 588 ntBASIC19.17■□□□□ 0.66
NCLP19338 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLP19338 CYP2A7P1-201ENST00000595391 815 ntBASIC19.17■□□□□ 0.66
NCLP19338 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 AC023511.2-201ENST00000618803 211 ntBASIC19.17■□□□□ 0.66
NCLP19338 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLP19338 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLP19338 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 SLC22A20-204ENST00000530038 1673 ntBASIC19.17■□□□□ 0.66
NCLP19338 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.17■□□□□ 0.66
NCLP19338 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLP19338 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NCLP19338 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLP19338 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.16■□□□□ 0.66
NCLP19338 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms