Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AL008707.1-201ENST00000422498 534 ntBASIC21.67■■□□□ 1.06
ATF3P18847 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.67■■□□□ 1.06
ATF3P18847 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF3P18847 EEF1DP6-201ENST00000449232 372 ntBASIC21.67■■□□□ 1.06
ATF3P18847 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21.67■■□□□ 1.06
ATF3P18847 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.67■■□□□ 1.06
ATF3P18847 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC21.67■■□□□ 1.06
ATF3P18847 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC21.67■■□□□ 1.06
ATF3P18847 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC21.67■■□□□ 1.06
ATF3P18847 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF3P18847 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ATF3P18847 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF3P18847 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF3P18847 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATF3P18847 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ATF3P18847 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.66■■□□□ 1.06
ATF3P18847 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.66■■□□□ 1.06
ATF3P18847 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
ATF3P18847 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.66■■□□□ 1.06
ATF3P18847 PCDHB18P-201ENST00000524813 2368 ntBASIC21.66■■□□□ 1.06
ATF3P18847 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 NDUFAB1P1-201ENST00000404262 460 ntBASIC21.66■■□□□ 1.06
ATF3P18847 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ATF3P18847 PRKXP1-201ENST00000561423 1122 ntBASIC21.66■■□□□ 1.06
ATF3P18847 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.66■■□□□ 1.06
ATF3P18847 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
ATF3P18847 AC060834.1-201ENST00000443027 2032 ntBASIC21.66■■□□□ 1.06
ATF3P18847 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
ATF3P18847 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.66■■□□□ 1.06
ATF3P18847 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.66■■□□□ 1.06
ATF3P18847 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF3P18847 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ATF3P18847 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 AC134407.2-201ENST00000625089 1978 ntBASIC21.65■■□□□ 1.06
ATF3P18847 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 TUBBP5-203ENST00000508529 1334 ntBASIC21.65■■□□□ 1.06
ATF3P18847 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC21.65■■□□□ 1.06
ATF3P18847 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 AL133267.1-201ENST00000398220 340 ntBASIC21.65■■□□□ 1.06
ATF3P18847 ACTBP8-201ENST00000403258 1108 ntBASIC21.65■■□□□ 1.06
ATF3P18847 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ATF3P18847 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
ATF3P18847 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC21.65■■□□□ 1.06
ATF3P18847 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC21.65■■□□□ 1.06
ATF3P18847 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC21.65■■□□□ 1.06
ATF3P18847 KLK11-210ENST00000600362 759 ntTSL 3 BASIC21.65■■□□□ 1.06
ATF3P18847 AC091544.8-201ENST00000619490 361 ntBASIC21.65■■□□□ 1.06
ATF3P18847 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
ATF3P18847 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATF3P18847 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC21.64■■□□□ 1.06
ATF3P18847 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC21.64■■□□□ 1.06
ATF3P18847 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
ATF3P18847 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ATF3P18847 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
ATF3P18847 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATF3P18847 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATF3P18847 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATF3P18847 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATF3P18847 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ATF3P18847 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATF3P18847 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC21.64■■□□□ 1.05
ATF3P18847 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATF3P18847 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.64■■□□□ 1.05
ATF3P18847 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.64■■□□□ 1.05
ATF3P18847 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.64■■□□□ 1.05
ATF3P18847 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ATF3P18847 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21.64■■□□□ 1.05
ATF3P18847 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.64■■□□□ 1.05
ATF3P18847 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.64■■□□□ 1.05
ATF3P18847 RN7SL774P-201ENST00000577467 290 ntBASIC21.64■■□□□ 1.05
ATF3P18847 MIR4750-201ENST00000584564 56 ntBASIC21.64■■□□□ 1.05
ATF3P18847 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATF3P18847 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ATF3P18847 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATF3P18847 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms