Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 AC134407.2-201ENST00000625089 1978 ntBASIC15.19■□□□□ 0.02
NCK1P16333 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 RPS2P1-201ENST00000434010 821 ntBASIC15.19■□□□□ 0.02
NCK1P16333 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 IGHV3-65-201ENST00000523210 341 ntBASIC15.19■□□□□ 0.02
NCK1P16333 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.19■□□□□ 0.02
NCK1P16333 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.19■□□□□ 0.02
NCK1P16333 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.19■□□□□ 0.02
NCK1P16333 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.19■□□□□ 0.02
NCK1P16333 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
NCK1P16333 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCK1P16333 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.18■□□□□ 0.02
NCK1P16333 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 AKR1C7P-201ENST00000305623 895 ntBASIC15.18■□□□□ 0.02
NCK1P16333 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.18■□□□□ 0.02
NCK1P16333 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.18■□□□□ 0.02
NCK1P16333 REXO1L6P-202ENST00000619970 1078 ntBASIC15.18■□□□□ 0.02
NCK1P16333 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.18■□□□□ 0.02
NCK1P16333 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCK1P16333 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NCK1P16333 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NCK1P16333 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms