Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP2P08253 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP2P08253 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 AL590560.3-201ENST00000623350 461 ntBASIC16.06■□□□□ 0.16
MMP2P08253 AC092127.1-201ENST00000567093 3455 ntBASIC16.06■□□□□ 0.16
MMP2P08253 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP2P08253 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MMP2P08253 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP2P08253 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 AC046158.3-201ENST00000624947 2558 ntBASIC16.05■□□□□ 0.16
MMP2P08253 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP2P08253 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 AC009090.5-201ENST00000624886 2285 ntBASIC16.05■□□□□ 0.16
MMP2P08253 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 AC055876.3-201ENST00000431496 288 ntBASIC16.05■□□□□ 0.16
MMP2P08253 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP2P08253 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP2P08253 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP2P08253 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 AC025048.3-201ENST00000590609 569 ntBASIC16.05■□□□□ 0.16
MMP2P08253 AC138649.4-201ENST00000612222 287 ntBASIC16.05■□□□□ 0.16
MMP2P08253 AC005702.4-201ENST00000618393 416 ntBASIC16.05■□□□□ 0.16
MMP2P08253 MIR6069-201ENST00000620069 79 ntBASIC16.05■□□□□ 0.16
MMP2P08253 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP2P08253 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP2P08253 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP2P08253 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.04■□□□□ 0.16
MMP2P08253 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 AC087499.5-201ENST00000452760 1342 ntBASIC16.04■□□□□ 0.16
MMP2P08253 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MMP2P08253 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP2P08253 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MMP2P08253 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.04■□□□□ 0.16
MMP2P08253 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms