Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 AC007950.2-201ENST00000615045 2347 ntBASIC16.82■□□□□ 0.28
OPHN1O60890 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 AL365203.3-201ENST00000609742 2057 ntBASIC16.82■□□□□ 0.28
OPHN1O60890 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
OPHN1O60890 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.81■□□□□ 0.28
OPHN1O60890 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 AL592424.1-201ENST00000563624 1536 ntBASIC16.81■□□□□ 0.28
OPHN1O60890 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
OPHN1O60890 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.81■□□□□ 0.28
OPHN1O60890 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.81■□□□□ 0.28
OPHN1O60890 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.81■□□□□ 0.28
OPHN1O60890 AC002472.2-201ENST00000442739 958 ntBASIC16.81■□□□□ 0.28
OPHN1O60890 KLF2P3-201ENST00000451977 1087 ntBASIC16.81■□□□□ 0.28
OPHN1O60890 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
OPHN1O60890 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.81■□□□□ 0.28
OPHN1O60890 AC005225.4-201ENST00000557330 545 ntBASIC16.81■□□□□ 0.28
OPHN1O60890 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.81■□□□□ 0.28
OPHN1O60890 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.81■□□□□ 0.28
OPHN1O60890 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.81■□□□□ 0.28
OPHN1O60890 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.81■□□□□ 0.28
OPHN1O60890 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
OPHN1O60890 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.81■□□□□ 0.28
OPHN1O60890 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPHN1O60890 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 U82695.1-201ENST00000635752 1889 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.8■□□□□ 0.28
OPHN1O60890 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.8■□□□□ 0.28
OPHN1O60890 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.8■□□□□ 0.28
OPHN1O60890 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.8■□□□□ 0.28
OPHN1O60890 TFAMP1-201ENST00000412727 736 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 AC140658.5-201ENST00000438532 169 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.8■□□□□ 0.28
OPHN1O60890 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 AC079140.1-201ENST00000508039 487 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 AL512356.2-201ENST00000546955 174 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 AL603832.2-201ENST00000566195 2125 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 AC099522.2-201ENST00000607001 744 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 AP001059.3-201ENST00000619053 235 ntBASIC16.8■□□□□ 0.28
OPHN1O60890 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
OPHN1O60890 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.8■□□□□ 0.28
OPHN1O60890 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.8■□□□□ 0.28
OPHN1O60890 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OPHN1O60890 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms