Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCC4O15439 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCC4O15439 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
ABCC4O15439 AC087499.6-201ENST00000411576 835 ntBASIC20.23■□□□□ 0.83
ABCC4O15439 AC136604.1-201ENST00000418535 575 ntBASIC20.23■□□□□ 0.83
ABCC4O15439 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCC4O15439 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCC4O15439 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCC4O15439 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCC4O15439 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.23■□□□□ 0.83
ABCC4O15439 AC132938.2-201ENST00000579188 680 ntBASIC20.23■□□□□ 0.83
ABCC4O15439 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ABCC4O15439 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ABCC4O15439 AC007431.3-201ENST00000623221 587 ntBASIC20.23■□□□□ 0.83
ABCC4O15439 AL591163.1-201ENST00000641757 987 ntBASIC20.23■□□□□ 0.83
ABCC4O15439 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ABCC4O15439 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCC4O15439 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCC4O15439 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCC4O15439 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ABCC4O15439 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCC4O15439 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ABCC4O15439 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCC4O15439 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCC4O15439 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCC4O15439 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ABCC4O15439 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ABCC4O15439 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCC4O15439 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ABCC4O15439 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ABCC4O15439 SLC7A15P-201ENST00000424028 1363 ntBASIC20.22■□□□□ 0.83
ABCC4O15439 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCC4O15439 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ABCC4O15439 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ABCC4O15439 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCC4O15439 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.22■□□□□ 0.83
ABCC4O15439 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCC4O15439 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCC4O15439 PHKG1P2-201ENST00000457537 863 ntBASIC20.22■□□□□ 0.83
ABCC4O15439 SERBP1P3-201ENST00000459980 809 ntBASIC20.22■□□□□ 0.83
ABCC4O15439 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.22■□□□□ 0.83
ABCC4O15439 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCC4O15439 AL033527.5-202ENST00000641632 1098 ntBASIC20.22■□□□□ 0.83
ABCC4O15439 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCC4O15439 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCC4O15439 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCC4O15439 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
ABCC4O15439 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCC4O15439 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCC4O15439 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ABCC4O15439 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCC4O15439 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 AC079776.1-201ENST00000401540 1152 ntBASIC20.21■□□□□ 0.83
ABCC4O15439 AL512384.1-201ENST00000406683 331 ntBASIC20.21■□□□□ 0.83
ABCC4O15439 RN7SL752P-201ENST00000463779 287 ntBASIC20.21■□□□□ 0.83
ABCC4O15439 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.21■□□□□ 0.83
ABCC4O15439 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.21■□□□□ 0.83
ABCC4O15439 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.21■□□□□ 0.83
ABCC4O15439 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCC4O15439 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.21■□□□□ 0.83
ABCC4O15439 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.21■□□□□ 0.83
ABCC4O15439 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCC4O15439 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
ABCC4O15439 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
ABCC4O15439 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCC4O15439 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ABCC4O15439 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
ABCC4O15439 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCC4O15439 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
ABCC4O15439 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ABCC4O15439 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.2■□□□□ 0.82
ABCC4O15439 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 AC008741.2-201ENST00000612792 3115 ntBASIC20.2■□□□□ 0.82
ABCC4O15439 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCC4O15439 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ABCC4O15439 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms