Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 AC008894.3-201ENST00000624324 3103 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
YJEFN3A6XGL0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
YJEFN3A6XGL0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC008741.2-201ENST00000612792 3115 ntBASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC236430.1-201ENST00000402231 743 ntBASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC136604.1-201ENST00000418535 575 ntBASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC114501.2-201ENST00000439631 535 ntBASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC092364.2-202ENST00000597012 1073 ntBASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AC004461.2-201ENST00000629517 803 ntBASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 PRAL-201ENST00000624952 3286 ntBASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.64■□□□□ 0.25
YJEFN3A6XGL0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 AC002472.2-201ENST00000442739 958 ntBASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 SERBP1P5-201ENST00000510079 1181 ntBASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 MIR4313-201ENST00000580760 101 ntBASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 AC074044.1-201ENST00000609673 707 ntBASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 AC004790.1-201ENST00000612686 536 ntBASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 AL607033.1-201ENST00000623900 1599 ntBASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
YJEFN3A6XGL0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YJEFN3A6XGL0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms