Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 MIR658-201ENST00000385210 100 ntBASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 TMEM14DP-201ENST00000422205 345 ntBASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AL158212.4-201ENST00000624062 1286 ntBASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AC134407.2-201ENST00000625089 1978 ntBASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3BA6NDS4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 MIR1909-201ENST00000411312 80 ntBASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 PHKG1P2-201ENST00000457537 863 ntBASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 AC133539.2-201ENST00000604757 467 ntBASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3BA6NDS4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3BA6NDS4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms