Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 AC027369.6-201ENST00000525520 931 ntBASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 AC061975.2-201ENST00000581722 295 ntBASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 AC138761.1-201ENST00000584393 385 ntBASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 AC007967.4-201ENST00000614700 386 ntBASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 AC134407.2-201ENST00000625089 1978 ntBASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPDC1A2A3K4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPDC1A2A3K4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 TSPY16P-201ENST00000449843 468 ntBASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 RNA5SP410-201ENST00000516285 106 ntBASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 AC073592.8-201ENST00000624126 511 ntBASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPDC1A2A3K4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 AC236430.1-201ENST00000402231 743 ntBASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 AL353705.2-201ENST00000428243 662 ntBASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PTPDC1A2A3K4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms