Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 AL160237.2-201ENST00000556165 472 ntBASIC15.22■□□□□ 0.03
AP4S1Q9Y587 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4S1Q9Y587 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 AC138969.2-201ENST00000532739 9932 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 FGD5P1-202ENST00000614866 2498 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 MROH4P-201ENST00000431302 1578 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 HCG4-201ENST00000418983 998 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 KRT17P6-201ENST00000453795 1220 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 BX276092.5-203ENST00000456199 560 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 BX005266.1-201ENST00000473402 457 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 SLC25A6P2-201ENST00000497974 877 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 AC006011.2-201ENST00000621313 1158 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.21■□□□□ 0.03
AP4S1Q9Y587 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4S1Q9Y587 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP4S1Q9Y587 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP4S1Q9Y587 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.21■□□□□ 0.02
AP4S1Q9Y587 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.21■□□□□ 0.02
AP4S1Q9Y587 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4S1Q9Y587 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4S1Q9Y587 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
AP4S1Q9Y587 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms