Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 AC007064.4-201ENST00000637740 555 ntBASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 AC067930.6-201ENST00000623257 4947 ntBASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 CDC14C-201ENST00000428251 1719 ntBASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 AL109954.1-202ENST00000564051 2148 ntBASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC016027.1-202ENST00000607927 1699 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AL671710.1-201ENST00000610245 2349 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 LINC02447-202ENST00000501888 2146 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC096734.2-201ENST00000562054 433 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC145285.3-201ENST00000564603 959 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AL031432.2-201ENST00000566714 459 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AL928711.1-201ENST00000570165 459 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 BX640515.1-201ENST00000617215 977 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 LINC00528-201ENST00000600723 2160 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms