Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 KRT18P25-201ENST00000508931 1278 ntBASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 C2orf69P2-201ENST00000562032 1123 ntBASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC23.36■■□□□ 1.33
SHANK2Q9UPX8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 AC022188.1-201ENST00000620960 1664 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 AC006001.1-201ENST00000325130 474 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 MIR663B-201ENST00000408361 115 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 FAM197Y7-201ENST00000432892 766 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 PFN1P12-201ENST00000455938 534 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 AC078819.1-201ENST00000547454 765 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 AC012085.1-201ENST00000548270 765 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 AL138799.1-201ENST00000448213 1675 ntBASIC23.35■■□□□ 1.33
SHANK2Q9UPX8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SHANK2Q9UPX8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 AC025181.2-201ENST00000606994 802 ntBASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHANK2Q9UPX8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHANK2Q9UPX8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms