Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 AC084364.1-201ENST00000551967 1556 ntBASIC21.28■■□□□ 1
NPC1L1Q9UHC9 TP53TG3HP-202ENST00000569755 579 ntBASIC21.28■■□□□ 1
NPC1L1Q9UHC9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 CHCHD2P3-201ENST00000603038 451 ntBASIC21.28■■□□□ 1
NPC1L1Q9UHC9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.28■■□□□ 1
NPC1L1Q9UHC9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 AC087499.6-201ENST00000411576 835 ntBASIC21.27■■□□□ 1
NPC1L1Q9UHC9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPC1L1Q9UHC9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPC1L1Q9UHC9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NPC1L1Q9UHC9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPC1L1Q9UHC9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPC1L1Q9UHC9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 AC104457.1-201ENST00000401024 814 ntBASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 RPL5P21-201ENST00000404620 815 ntBASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 AL442647.2-201ENST00000429864 857 ntBASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 WASH4P-201ENST00000564273 1246 ntBASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 TMEM261P1-201ENST00000604899 340 ntBASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 AC007541.1-201ENST00000570282 1469 ntBASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1L1Q9UHC9 LINC02199-201ENST00000506655 2702 ntBASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 FAM86LP-201ENST00000478302 853 ntBASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC21.25■□□□□ 0.99
NPC1L1Q9UHC9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms