Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 API5-211ENST00000534695 560 ntTSL 5 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 AL132655.2-201ENST00000596276 594 ntBASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 AC007541.1-201ENST00000570282 1469 ntBASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 AC069224.1-201ENST00000566372 1715 ntBASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 CROCCP1-201ENST00000426910 5675 ntBASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20BQ9P0W2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 SPDYE19P-201ENST00000338590 713 ntBASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 DOC2GP-202ENST00000514950 1163 ntBASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 CDC14C-201ENST00000428251 1719 ntBASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20BQ9P0W2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 AP001282.1-201ENST00000531301 1499 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms