Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
C12orf4Q9NQ89 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 KRT16P4-201ENST00000453883 522 ntBASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 AC138894.3-201ENST00000603787 634 ntBASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 AL589182.2-201ENST00000619332 1049 ntBASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.07□□□□□ -0.16
C12orf4Q9NQ89 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 RBM17P3-201ENST00000417687 1192 ntBASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 AC106795.1-205ENST00000512851 1056 ntBASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 AC091167.2-201ENST00000579581 588 ntBASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 MPDU1-223ENST00000582151 728 ntBASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 AC092119.3-201ENST00000612618 583 ntBASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 AC013268.4-201ENST00000637413 2228 ntBASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
C12orf4Q9NQ89 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms