Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CR382287.1-201ENST00000623954 586 ntBASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AC134407.2-201ENST00000625089 1978 ntBASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTFDC1Q9BY42 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 MIR326-201ENST00000362220 95 ntBASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 AC015910.1-201ENST00000579400 975 ntBASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.22■□□□□ 0.67
RTFDC1Q9BY42 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 GAPDHP40-201ENST00000505218 1006 ntBASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 AL118558.3-201ENST00000607414 1079 ntBASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms