Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AL592309.1-201ENST00000443127 649 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AC079140.1-201ENST00000508039 487 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AL135744.1-201ENST00000565098 629 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AC092364.2-202ENST00000597012 1073 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AC093512.1-201ENST00000617969 520 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AL353732.1-201ENST00000569618 1459 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 EGFEM1P-202ENST00000431685 1563 ntBASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 FAM8A3P-201ENST00000427218 844 ntBASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 FAM86GP-201ENST00000448322 971 ntBASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 AL391256.1-201ENST00000443260 1855 ntBASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAF4Q9BUZ4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF4Q9BUZ4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms