Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 AMT-233ENST00000636522 1620 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 PRSS29P-201ENST00000440800 595 ntBASIC9.64□□□□□ -0.87
LIMD2Q9BT23 AC018712.1-201ENST00000455767 687 ntBASIC9.64□□□□□ -0.87
LIMD2Q9BT23 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 POU5F1P6-201ENST00000466990 990 ntBASIC9.64□□□□□ -0.87
LIMD2Q9BT23 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 AC021097.1-201ENST00000607902 574 ntBASIC9.64□□□□□ -0.87
LIMD2Q9BT23 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 AC012569.1-201ENST00000591191 1524 ntBASIC9.64□□□□□ -0.87
LIMD2Q9BT23 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LIMD2Q9BT23 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 PC-204ENST00000524491 1714 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 LINC01144-201ENST00000626198 1710 ntBASIC9.63□□□□□ -0.87
LIMD2Q9BT23 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms