Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AC005912.2-201ENST00000619492 2400 ntBASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AC013726.1-201ENST00000563747 2285 ntBASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AC092329.2-201ENST00000598402 547 ntBASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AL731571.1-201ENST00000617058 5428 ntBASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AC004817.3-201ENST00000602957 2129 ntBASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NIPSNAP3BQ9BS92 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MIR648-201ENST00000385046 94 ntBASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AC111152.3-201ENST00000569699 673 ntBASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AP002414.4-201ENST00000589764 1148 ntBASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AL592071.1-201ENST00000611956 408 ntBASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NIPSNAP3BQ9BS92 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NIPSNAP3BQ9BS92 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
NIPSNAP3BQ9BS92 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.9□□□□□ -0.35
NIPSNAP3BQ9BS92 AC005252.3-201ENST00000623855 2258 ntBASIC12.9□□□□□ -0.35
NIPSNAP3BQ9BS92 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms