Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 COX5A-204ENST00000567270 579 ntTSL 3 BASIC10.68□□□□□ -0.7
LITAFQ99732 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.68□□□□□ -0.7
LITAFQ99732 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.67□□□□□ -0.7
LITAFQ99732 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 PKD1P5-201ENST00000532415 10291 ntBASIC10.67□□□□□ -0.7
LITAFQ99732 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC10.67□□□□□ -0.7
LITAFQ99732 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 FUOM-202ENST00000368551 628 ntTSL 3 BASIC10.67□□□□□ -0.7
LITAFQ99732 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 VENTXP7-201ENST00000475503 772 ntBASIC10.67□□□□□ -0.7
LITAFQ99732 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.67□□□□□ -0.7
LITAFQ99732 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 ABR-204ENST00000543210 1049 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.67□□□□□ -0.7
LITAFQ99732 ABR-217ENST00000572441 563 ntTSL 4 BASIC10.67□□□□□ -0.7
LITAFQ99732 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 AC139887.4-201ENST00000607877 719 ntBASIC10.67□□□□□ -0.7
LITAFQ99732 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC10.67□□□□□ -0.7
LITAFQ99732 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
LITAFQ99732 AF228730.7-201ENST00000641842 219 ntBASIC10.67□□□□□ -0.7
LITAFQ99732 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LITAFQ99732 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LITAFQ99732 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LITAFQ99732 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LITAFQ99732 AC134407.2-201ENST00000625089 1978 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms