Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 AC021097.1-201ENST00000607902 574 ntBASIC13.07□□□□□ -0.32
RAB40CQ96S21 AP001269.4-201ENST00000609611 512 ntBASIC13.07□□□□□ -0.32
RAB40CQ96S21 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 RBM17P3-201ENST00000417687 1192 ntBASIC13.06□□□□□ -0.32
RAB40CQ96S21 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 MIR3652-201ENST00000579335 131 ntBASIC13.06□□□□□ -0.32
RAB40CQ96S21 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 AL365330.1-201ENST00000607459 531 ntBASIC13.06□□□□□ -0.32
RAB40CQ96S21 GGTLC5P-201ENST00000617623 998 ntBASIC13.06□□□□□ -0.32
RAB40CQ96S21 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAB40CQ96S21 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RAB40CQ96S21 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 AC005089.1-201ENST00000619486 2241 ntBASIC13.05□□□□□ -0.32
RAB40CQ96S21 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 AC106881.1-201ENST00000605849 3329 ntBASIC13.05□□□□□ -0.32
RAB40CQ96S21 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 KRT16P4-201ENST00000453883 522 ntBASIC13.05□□□□□ -0.32
RAB40CQ96S21 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms