Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC026884.1-201ENST00000418296 457 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 VENTXP4-201ENST00000449029 958 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC093826.1-201ENST00000508655 993 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CYP4F36P-201ENST00000589193 186 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CYP2AB1P-202ENST00000454440 1456 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AL136309.1-201ENST00000403917 691 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC136604.1-201ENST00000418535 575 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 FAM58BP-201ENST00000439056 645 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC008723.1-201ENST00000506922 207 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC090164.2-201ENST00000611487 516 ntBASIC4.72□□□□□ -1.65
HMCN1Q96RW7 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HMCN1Q96RW7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AL049542.1-201ENST00000430231 278 ntBASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 DBP-202ENST00000593500 712 ntTSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 AC136759.1-202ENST00000530858 2194 ntBASIC4.71□□□□□ -1.65
HMCN1Q96RW7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HMCN1Q96RW7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms