Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.65■□□□□ 0.74
NLRP3Q96P20 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.65■□□□□ 0.74
NLRP3Q96P20 AP001063.1-201ENST00000568332 529 ntBASIC19.65■□□□□ 0.74
NLRP3Q96P20 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.65■□□□□ 0.74
NLRP3Q96P20 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.65■□□□□ 0.74
NLRP3Q96P20 MIR6869-201ENST00000619434 62 ntBASIC19.65■□□□□ 0.74
NLRP3Q96P20 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 AC134312.5-201ENST00000568031 1313 ntBASIC19.65■□□□□ 0.74
NLRP3Q96P20 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.65■□□□□ 0.74
NLRP3Q96P20 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.65■□□□□ 0.74
NLRP3Q96P20 AC092171.3-201ENST00000610122 2651 ntBASIC19.65■□□□□ 0.74
NLRP3Q96P20 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NLRP3Q96P20 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NLRP3Q96P20 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NLRP3Q96P20 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.64■□□□□ 0.74
NLRP3Q96P20 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
NLRP3Q96P20 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
NLRP3Q96P20 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NLRP3Q96P20 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
NLRP3Q96P20 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 FAM21FP-201ENST00000426241 1131 ntBASIC19.64■□□□□ 0.73
NLRP3Q96P20 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 AC012441.1-201ENST00000446669 685 ntBASIC19.64■□□□□ 0.73
NLRP3Q96P20 AL355994.2-201ENST00000447882 704 ntBASIC19.64■□□□□ 0.73
NLRP3Q96P20 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 AC093433.1-201ENST00000458048 571 ntBASIC19.64■□□□□ 0.73
NLRP3Q96P20 FTH1P14-201ENST00000482930 551 ntBASIC19.64■□□□□ 0.73
NLRP3Q96P20 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 AC000095.1-201ENST00000603208 874 ntBASIC19.64■□□□□ 0.73
NLRP3Q96P20 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 AL607033.1-201ENST00000623900 1599 ntBASIC19.64■□□□□ 0.73
NLRP3Q96P20 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NLRP3Q96P20 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NLRP3Q96P20 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 BRWD1P1-201ENST00000401091 371 ntBASIC19.63■□□□□ 0.73
NLRP3Q96P20 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NLRP3Q96P20 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRP3Q96P20 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRP3Q96P20 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
NLRP3Q96P20 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRP3Q96P20 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRP3Q96P20 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRP3Q96P20 AL121723.1-201ENST00000445194 1519 ntBASIC19.62■□□□□ 0.73
NLRP3Q96P20 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRP3Q96P20 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.62■□□□□ 0.73
NLRP3Q96P20 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NLRP3Q96P20 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NLRP3Q96P20 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms