Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 FRMD8P1-201ENST00000440433 1524 ntBASIC14.56□□□□□ -0.08
LRRC46Q96FV0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC46Q96FV0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AC116353.5-201ENST00000638148 1699 ntBASIC14.55□□□□□ -0.08
LRRC46Q96FV0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.55□□□□□ -0.08
LRRC46Q96FV0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AC005225.4-201ENST00000557330 545 ntBASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AC012645.4-201ENST00000610691 1061 ntBASIC14.55□□□□□ -0.08
LRRC46Q96FV0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 AP3S2-216ENST00000617003 1561 ntBASIC14.55□□□□□ -0.08
LRRC46Q96FV0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC46Q96FV0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 AC006449.5-201ENST00000610658 2098 ntBASIC14.54□□□□□ -0.08
LRRC46Q96FV0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 AC104640.1-201ENST00000562617 2109 ntBASIC14.54□□□□□ -0.08
LRRC46Q96FV0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 PIN1P1-201ENST00000412108 996 ntBASIC14.54□□□□□ -0.08
LRRC46Q96FV0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 HLA-V-204ENST00000476601 1289 ntBASIC14.54□□□□□ -0.08
LRRC46Q96FV0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 MIR4492-201ENST00000581627 80 ntBASIC14.54□□□□□ -0.08
LRRC46Q96FV0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms