Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT43Q96FT9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT43Q96FT9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 AC093724.1-201ENST00000448659 1027 ntBASIC16.59■□□□□ 0.25
IFT43Q96FT9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SPCS2P1-201ENST00000561636 679 ntBASIC16.59■□□□□ 0.25
IFT43Q96FT9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 AC084121.4-201ENST00000641598 221 ntBASIC16.59■□□□□ 0.25
IFT43Q96FT9 AF228730.8-201ENST00000642140 221 ntBASIC16.59■□□□□ 0.25
IFT43Q96FT9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 AC063926.3-201ENST00000624734 5658 ntBASIC16.59■□□□□ 0.25
IFT43Q96FT9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 MTHFR-217ENST00000641820 1569 ntBASIC16.59■□□□□ 0.25
IFT43Q96FT9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.59■□□□□ 0.25
IFT43Q96FT9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT43Q96FT9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IFT43Q96FT9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
IFT43Q96FT9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
IFT43Q96FT9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.58■□□□□ 0.25
IFT43Q96FT9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
IFT43Q96FT9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 AL096865.1-201ENST00000606796 927 ntBASIC16.58■□□□□ 0.24
IFT43Q96FT9 AC093512.1-201ENST00000617969 520 ntBASIC16.58■□□□□ 0.24
IFT43Q96FT9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 AP001059.3-201ENST00000619053 235 ntBASIC16.58■□□□□ 0.24
IFT43Q96FT9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms